Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDRT1O95170 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDRT1O95170 AL096828.2-201ENST00000567259 1965 ntBASIC16.28■□□□□ 0.2
CDRT1O95170 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CDRT1O95170 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT1O95170 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.28■□□□□ 0.2
CDRT1O95170 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC16.28■□□□□ 0.2
CDRT1O95170 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CDRT1O95170 AC133041.1-202ENST00000642053 222 ntBASIC16.28■□□□□ 0.2
CDRT1O95170 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 AC018695.7-201ENST00000624587 2492 ntBASIC16.28■□□□□ 0.2
CDRT1O95170 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 AL139384.1-201ENST00000612143 3047 ntBASIC16.28■□□□□ 0.2
CDRT1O95170 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 KRT8P32-201ENST00000512863 1461 ntBASIC16.28■□□□□ 0.2
CDRT1O95170 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.28■□□□□ 0.2
CDRT1O95170 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CDRT1O95170 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC16.27■□□□□ 0.2
CDRT1O95170 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.27■□□□□ 0.2
CDRT1O95170 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.27■□□□□ 0.2
CDRT1O95170 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.27■□□□□ 0.2
CDRT1O95170 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CDRT1O95170 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC16.27■□□□□ 0.2
CDRT1O95170 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 AC006116.8-202ENST00000587620 1550 ntBASIC16.27■□□□□ 0.2
CDRT1O95170 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.27■□□□□ 0.2
CDRT1O95170 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 AC069152.1-201ENST00000438030 544 ntBASIC16.27■□□□□ 0.2
CDRT1O95170 UNC93B4-201ENST00000505679 747 ntBASIC16.27■□□□□ 0.2
CDRT1O95170 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC16.27■□□□□ 0.2
CDRT1O95170 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC16.27■□□□□ 0.2
CDRT1O95170 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.27■□□□□ 0.2
CDRT1O95170 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.27■□□□□ 0.2
CDRT1O95170 AL160286.2-201ENST00000567150 934 ntBASIC16.27■□□□□ 0.2
CDRT1O95170 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.27■□□□□ 0.2
CDRT1O95170 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.27■□□□□ 0.2
CDRT1O95170 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CDRT1O95170 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
CDRT1O95170 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.27■□□□□ 0.19
CDRT1O95170 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CDRT1O95170 AL118508.1-201ENST00000613502 2345 ntBASIC16.27■□□□□ 0.19
CDRT1O95170 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.26■□□□□ 0.19
CDRT1O95170 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC16.26■□□□□ 0.19
CDRT1O95170 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.26■□□□□ 0.19
CDRT1O95170 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.26■□□□□ 0.19
CDRT1O95170 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.26■□□□□ 0.19
CDRT1O95170 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.26■□□□□ 0.19
CDRT1O95170 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CDRT1O95170 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms