Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GFRA3O60609 AC004817.3-201ENST00000602957 2129 ntBASIC17.62■□□□□ 0.41
GFRA3O60609 AL357033.4-201ENST00000617703 1807 ntBASIC17.61■□□□□ 0.41
GFRA3O60609 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.61■□□□□ 0.41
GFRA3O60609 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC17.61■□□□□ 0.41
GFRA3O60609 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
GFRA3O60609 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.61■□□□□ 0.41
GFRA3O60609 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.61■□□□□ 0.41
GFRA3O60609 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC17.61■□□□□ 0.41
GFRA3O60609 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.61■□□□□ 0.41
GFRA3O60609 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.61■□□□□ 0.41
GFRA3O60609 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.61■□□□□ 0.41
GFRA3O60609 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
GFRA3O60609 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
GFRA3O60609 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC17.61■□□□□ 0.41
GFRA3O60609 AL589182.2-201ENST00000619332 1049 ntBASIC17.61■□□□□ 0.41
GFRA3O60609 AC010507.1-201ENST00000633895 436 ntBASIC17.61■□□□□ 0.41
GFRA3O60609 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GFRA3O60609 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.61■□□□□ 0.41
GFRA3O60609 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
GFRA3O60609 FBXW4P1-201ENST00000426721 2239 ntBASIC17.6■□□□□ 0.41
GFRA3O60609 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 USP48-205ENST00000421625 2818 ntTSL 2 BASIC17.6■□□□□ 0.41
GFRA3O60609 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 IGLL3P-201ENST00000412472 434 ntBASIC17.6■□□□□ 0.41
GFRA3O60609 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
GFRA3O60609 PRYP5-201ENST00000451909 266 ntBASIC17.6■□□□□ 0.41
GFRA3O60609 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
GFRA3O60609 AC096734.2-201ENST00000562054 433 ntBASIC17.6■□□□□ 0.41
GFRA3O60609 AL596325.1-201ENST00000563991 1082 ntBASIC17.6■□□□□ 0.41
GFRA3O60609 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.6■□□□□ 0.41
GFRA3O60609 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.6■□□□□ 0.41
GFRA3O60609 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC17.6■□□□□ 0.41
GFRA3O60609 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
GFRA3O60609 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.6■□□□□ 0.41
GFRA3O60609 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.6■□□□□ 0.41
GFRA3O60609 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
GFRA3O60609 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC17.59■□□□□ 0.41
GFRA3O60609 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.59■□□□□ 0.41
GFRA3O60609 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.59■□□□□ 0.41
GFRA3O60609 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.59■□□□□ 0.41
GFRA3O60609 IGHV3-65-201ENST00000523210 341 ntBASIC17.59■□□□□ 0.41
GFRA3O60609 IGHV3-71-201ENST00000523324 359 ntBASIC17.59■□□□□ 0.41
GFRA3O60609 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.59■□□□□ 0.41
GFRA3O60609 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.59■□□□□ 0.41
GFRA3O60609 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC17.59■□□□□ 0.41
GFRA3O60609 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.59■□□□□ 0.41
GFRA3O60609 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC17.59■□□□□ 0.41
GFRA3O60609 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.59■□□□□ 0.41
GFRA3O60609 REXO1L3P-201ENST00000622202 1288 ntBASIC17.59■□□□□ 0.41
GFRA3O60609 AC025048.6-201ENST00000634326 1161 ntBASIC17.59■□□□□ 0.41
GFRA3O60609 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
GFRA3O60609 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
GFRA3O60609 AL691432.2-201ENST00000607222 2038 ntBASIC17.59■□□□□ 0.41
GFRA3O60609 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 AC006504.4-201ENST00000592118 1568 ntBASIC17.58■□□□□ 0.41
GFRA3O60609 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
GFRA3O60609 AC025580.3-201ENST00000617932 1424 ntBASIC17.58■□□□□ 0.41
GFRA3O60609 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.58■□□□□ 0.4
GFRA3O60609 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms