Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PEX1O43933 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 AC004980.1-204ENST00000429707 299 ntBASIC17.79■□□□□ 0.44
PEX1O43933 FAM210CP-201ENST00000445714 574 ntBASIC17.79■□□□□ 0.44
PEX1O43933 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 MIR6786-201ENST00000616843 113 ntBASIC17.79■□□□□ 0.44
PEX1O43933 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.79■□□□□ 0.44
PEX1O43933 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PEX1O43933 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PEX1O43933 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.78■□□□□ 0.44
PEX1O43933 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.78■□□□□ 0.44
PEX1O43933 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.78■□□□□ 0.44
PEX1O43933 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.78■□□□□ 0.44
PEX1O43933 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.78■□□□□ 0.44
PEX1O43933 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.78■□□□□ 0.44
PEX1O43933 KRT18P21-201ENST00000515767 1272 ntBASIC17.78■□□□□ 0.44
PEX1O43933 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.78■□□□□ 0.44
PEX1O43933 FITM1-202ENST00000559294 800 ntBASIC17.78■□□□□ 0.44
PEX1O43933 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
PEX1O43933 HLA-A-209ENST00000638375 975 ntBASIC17.78■□□□□ 0.44
PEX1O43933 KRT8P8-201ENST00000434750 1448 ntBASIC17.78■□□□□ 0.44
PEX1O43933 KRT8P9-201ENST00000558927 1449 ntBASIC17.78■□□□□ 0.44
PEX1O43933 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.78■□□□□ 0.44
PEX1O43933 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.78■□□□□ 0.44
PEX1O43933 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.78■□□□□ 0.44
PEX1O43933 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PEX1O43933 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.78■□□□□ 0.44
PEX1O43933 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.77■□□□□ 0.44
PEX1O43933 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.77■□□□□ 0.44
PEX1O43933 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
PEX1O43933 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PEX1O43933 MESTP1-201ENST00000404287 994 ntBASIC17.77■□□□□ 0.44
PEX1O43933 AL390955.1-201ENST00000428694 934 ntBASIC17.77■□□□□ 0.44
PEX1O43933 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.77■□□□□ 0.44
PEX1O43933 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
PEX1O43933 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.77■□□□□ 0.44
PEX1O43933 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.77■□□□□ 0.44
PEX1O43933 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PEX1O43933 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PEX1O43933 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.43
PEX1O43933 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.77■□□□□ 0.43
PEX1O43933 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
PEX1O43933 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PEX1O43933 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEX1O43933 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PEX1O43933 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.76■□□□□ 0.43
PEX1O43933 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEX1O43933 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEX1O43933 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PEX1O43933 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms