Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.26■□□□□ 0.51
COPEO14579 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
COPEO14579 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
COPEO14579 AC006116.8-202ENST00000587620 1550 ntBASIC18.25■□□□□ 0.51
COPEO14579 AC099343.3-201ENST00000605834 2503 ntBASIC18.25■□□□□ 0.51
COPEO14579 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.25■□□□□ 0.51
COPEO14579 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.25■□□□□ 0.51
COPEO14579 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.25■□□□□ 0.51
COPEO14579 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COPEO14579 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.25■□□□□ 0.51
COPEO14579 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 ISG20-202ENST00000379224 540 ntTSL 3 BASIC18.25■□□□□ 0.51
COPEO14579 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 AL023284.2-201ENST00000405850 579 ntBASIC18.25■□□□□ 0.51
COPEO14579 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.25■□□□□ 0.51
COPEO14579 MCCD1P1-208ENST00000445732 328 ntBASIC18.25■□□□□ 0.51
COPEO14579 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.25■□□□□ 0.51
COPEO14579 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COPEO14579 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
COPEO14579 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.25■□□□□ 0.51
COPEO14579 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
COPEO14579 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
COPEO14579 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.24■□□□□ 0.51
COPEO14579 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
COPEO14579 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 AL353807.1-201ENST00000427475 662 ntBASIC18.24■□□□□ 0.51
COPEO14579 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.24■□□□□ 0.51
COPEO14579 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.24■□□□□ 0.51
COPEO14579 AC108860.2-201ENST00000562760 2183 ntBASIC18.24■□□□□ 0.51
COPEO14579 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.24■□□□□ 0.51
COPEO14579 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
COPEO14579 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.23■□□□□ 0.51
COPEO14579 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.23■□□□□ 0.51
COPEO14579 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.23■□□□□ 0.51
COPEO14579 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
COPEO14579 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.23■□□□□ 0.51
COPEO14579 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.23■□□□□ 0.51
COPEO14579 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.23■□□□□ 0.51
COPEO14579 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.23■□□□□ 0.51
COPEO14579 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
COPEO14579 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.23■□□□□ 0.51
COPEO14579 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
COPEO14579 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.23■□□□□ 0.51
COPEO14579 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
COPEO14579 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
COPEO14579 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms