Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.69■□□□□ 0.42
UBFD1O14562 FITM1-202ENST00000559294 800 ntBASIC17.69■□□□□ 0.42
UBFD1O14562 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.69■□□□□ 0.42
UBFD1O14562 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
UBFD1O14562 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
UBFD1O14562 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.69■□□□□ 0.42
UBFD1O14562 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
UBFD1O14562 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
UBFD1O14562 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
UBFD1O14562 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.68■□□□□ 0.42
UBFD1O14562 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.68■□□□□ 0.42
UBFD1O14562 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
UBFD1O14562 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.68■□□□□ 0.42
UBFD1O14562 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.68■□□□□ 0.42
UBFD1O14562 AC108860.2-201ENST00000562760 2183 ntBASIC17.68■□□□□ 0.42
UBFD1O14562 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.68■□□□□ 0.42
UBFD1O14562 AC112497.1-201ENST00000624824 639 ntBASIC17.68■□□□□ 0.42
UBFD1O14562 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
UBFD1O14562 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.68■□□□□ 0.42
UBFD1O14562 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
UBFD1O14562 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
UBFD1O14562 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
UBFD1O14562 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
UBFD1O14562 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
UBFD1O14562 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.67■□□□□ 0.42
UBFD1O14562 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.67■□□□□ 0.42
UBFD1O14562 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.67■□□□□ 0.42
UBFD1O14562 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 INGX-201ENST00000359239 846 ntBASIC17.67■□□□□ 0.42
UBFD1O14562 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 BX088651.1-201ENST00000540551 451 ntBASIC17.67■□□□□ 0.42
UBFD1O14562 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
UBFD1O14562 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
UBFD1O14562 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.67■□□□□ 0.42
UBFD1O14562 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.67■□□□□ 0.42
UBFD1O14562 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
UBFD1O14562 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBFD1O14562 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
UBFD1O14562 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.66■□□□□ 0.42
UBFD1O14562 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.66■□□□□ 0.42
UBFD1O14562 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 CCR12P-201ENST00000446203 998 ntBASIC17.66■□□□□ 0.42
UBFD1O14562 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 AC008550.1-201ENST00000511500 884 ntBASIC17.66■□□□□ 0.42
UBFD1O14562 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.66■□□□□ 0.42
UBFD1O14562 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
UBFD1O14562 AC132938.6-201ENST00000623828 1655 ntBASIC17.66■□□□□ 0.42
UBFD1O14562 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
UBFD1O14562 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
UBFD1O14562 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
UBFD1O14562 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms