Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN4O14493 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.16■□□□□ 0.34
CLDN4O14493 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CLDN4O14493 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN4O14493 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 AL645929.1-201ENST00000420084 975 ntBASIC17.16■□□□□ 0.34
CLDN4O14493 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN4O14493 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN4O14493 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN4O14493 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.16■□□□□ 0.34
CLDN4O14493 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 AL024508.2-201ENST00000607749 1894 ntBASIC17.16■□□□□ 0.34
CLDN4O14493 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.16■□□□□ 0.34
CLDN4O14493 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CLDN4O14493 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.16■□□□□ 0.34
CLDN4O14493 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN4O14493 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.15■□□□□ 0.34
CLDN4O14493 ESPNP-201ENST00000270691 2015 ntBASIC17.15■□□□□ 0.34
CLDN4O14493 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
CLDN4O14493 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.15■□□□□ 0.34
CLDN4O14493 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN4O14493 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.15■□□□□ 0.34
CLDN4O14493 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC17.15■□□□□ 0.34
CLDN4O14493 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.15■□□□□ 0.34
CLDN4O14493 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC17.15■□□□□ 0.34
CLDN4O14493 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.15■□□□□ 0.34
CLDN4O14493 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CLDN4O14493 AL162741.1-201ENST00000565563 1558 ntBASIC17.15■□□□□ 0.34
CLDN4O14493 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
CLDN4O14493 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
CLDN4O14493 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC17.14■□□□□ 0.33
CLDN4O14493 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN4O14493 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 FAM86EP-206ENST00000510506 987 ntBASIC17.14■□□□□ 0.33
CLDN4O14493 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.14■□□□□ 0.33
CLDN4O14493 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 AC091076.1-201ENST00000610741 619 ntBASIC17.14■□□□□ 0.33
CLDN4O14493 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.14■□□□□ 0.33
CLDN4O14493 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CLDN4O14493 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms