Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC17.03■□□□□ 0.32
CACNA1AO00555 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1AO00555 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.03■□□□□ 0.32
CACNA1AO00555 FEM1AP4-201ENST00000443167 1987 ntBASIC17.03■□□□□ 0.32
CACNA1AO00555 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CACNA1AO00555 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1AO00555 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CACNA1AO00555 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.02■□□□□ 0.32
CACNA1AO00555 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 FAM58DP-201ENST00000428076 619 ntBASIC17.02■□□□□ 0.32
CACNA1AO00555 MTCL1P1-201ENST00000446207 792 ntBASIC17.02■□□□□ 0.32
CACNA1AO00555 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA1AO00555 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.02■□□□□ 0.32
CACNA1AO00555 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.02■□□□□ 0.32
CACNA1AO00555 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.02■□□□□ 0.32
CACNA1AO00555 TUBB3P1-201ENST00000405796 1332 ntBASIC17.02■□□□□ 0.32
CACNA1AO00555 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CACNA1AO00555 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
CACNA1AO00555 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CACNA1AO00555 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1AO00555 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1AO00555 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CACNA1AO00555 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.31
CACNA1AO00555 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1AO00555 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.02■□□□□ 0.31
CACNA1AO00555 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.02■□□□□ 0.31
CACNA1AO00555 AC008667.4-201ENST00000607370 168 ntBASIC17.02■□□□□ 0.31
CACNA1AO00555 AL162274.1-201ENST00000617191 1098 ntBASIC17.02■□□□□ 0.31
CACNA1AO00555 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1AO00555 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CACNA1AO00555 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1AO00555 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.01■□□□□ 0.31
CACNA1AO00555 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CACNA1AO00555 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 MRPS18AP1-201ENST00000414458 589 ntBASIC17.01■□□□□ 0.31
CACNA1AO00555 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1AO00555 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CACNA1AO00555 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 KRT8P47-201ENST00000604727 1398 ntBASIC17.01■□□□□ 0.31
CACNA1AO00555 FO538757.1-201ENST00000623083 1397 ntBASIC17.01■□□□□ 0.31
CACNA1AO00555 KRT8P32-201ENST00000512863 1461 ntBASIC17.01■□□□□ 0.31
CACNA1AO00555 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.01■□□□□ 0.31
CACNA1AO00555 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CACNA1AO00555 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.01■□□□□ 0.31
CACNA1AO00555 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC17.01■□□□□ 0.31
CACNA1AO00555 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.01■□□□□ 0.31
CACNA1AO00555 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CACNA1AO00555 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CACNA1AO00555 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17■□□□□ 0.31
CACNA1AO00555 GUSBP5-202ENST00000510805 1989 ntBASIC17■□□□□ 0.31
CACNA1AO00555 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC17■□□□□ 0.31
CACNA1AO00555 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17■□□□□ 0.31
CACNA1AO00555 TIMM8BP1-201ENST00000452384 211 ntBASIC17■□□□□ 0.31
CACNA1AO00555 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17■□□□□ 0.31
CACNA1AO00555 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC17■□□□□ 0.31
CACNA1AO00555 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17■□□□□ 0.31
CACNA1AO00555 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CACNA1AO00555 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17■□□□□ 0.31
CACNA1AO00555 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17■□□□□ 0.31
CACNA1AO00555 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17■□□□□ 0.31
CACNA1AO00555 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CACNA1AO00555 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
CACNA1AO00555 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms