Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
O00370 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.44■□□□□ 0.7
O00370 AC092597.1-201ENST00000487352 616 ntBASIC19.44■□□□□ 0.7
O00370 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.44■□□□□ 0.7
O00370 AL049597.2-201ENST00000565575 961 ntBASIC19.44■□□□□ 0.7
O00370 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
O00370 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.44■□□□□ 0.7
O00370 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.44■□□□□ 0.7
O00370 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.44■□□□□ 0.7
O00370 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.44■□□□□ 0.7
O00370 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.44■□□□□ 0.7
O00370 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
O00370 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.43■□□□□ 0.7
O00370 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.43■□□□□ 0.7
O00370 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
O00370 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
O00370 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.43■□□□□ 0.7
O00370 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
O00370 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.43■□□□□ 0.7
O00370 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
O00370 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.43■□□□□ 0.7
O00370 AL136038.4-201ENST00000603606 1261 ntBASIC19.43■□□□□ 0.7
O00370 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
O00370 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
O00370 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
O00370 GMCL1P1-201ENST00000463439 1581 ntBASIC19.43■□□□□ 0.7
O00370 AL391807.1-203ENST00000604392 2365 ntBASIC19.43■□□□□ 0.7
O00370 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
O00370 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
O00370 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.42■□□□□ 0.7
O00370 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
O00370 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.42■□□□□ 0.7
O00370 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.42■□□□□ 0.7
O00370 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.42■□□□□ 0.7
O00370 HLA-F-220ENST00000434407 884 ntBASIC19.42■□□□□ 0.7
O00370 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 AC112907.2-201ENST00000448639 330 ntBASIC19.42■□□□□ 0.7
O00370 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 NME3-204ENST00000563498 920 ntTSL 2 BASIC19.42■□□□□ 0.7
O00370 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.42■□□□□ 0.7
O00370 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
O00370 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.42■□□□□ 0.7
O00370 LINC01126-201ENST00000623515 1646 ntBASIC19.42■□□□□ 0.7
O00370 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.42■□□□□ 0.7
O00370 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
O00370 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
O00370 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
O00370 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.41■□□□□ 0.7
O00370 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 ABALON-201ENST00000629058 1903 ntBASIC19.41■□□□□ 0.7
O00370 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
O00370 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 HBZP1-201ENST00000354915 429 ntBASIC19.41■□□□□ 0.7
O00370 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.41■□□□□ 0.7
O00370 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.41■□□□□ 0.7
O00370 LINC01238-205ENST00000567549 1107 ntBASIC19.41■□□□□ 0.7
O00370 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
O00370 FGF14-AS2-201ENST00000606448 1074 ntBASIC19.41■□□□□ 0.7
O00370 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.41■□□□□ 0.7
O00370 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.41■□□□□ 0.7
O00370 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
O00370 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.41■□□□□ 0.7
O00370 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.41■□□□□ 0.7
O00370 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
O00370 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 AC020763.4-201ENST00000623414 4170 ntBASIC19.4■□□□□ 0.7
O00370 AL162741.1-201ENST00000565563 1558 ntBASIC19.4■□□□□ 0.7
O00370 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
O00370 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.4■□□□□ 0.7
O00370 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC19.4■□□□□ 0.7
O00370 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
O00370 AC093677.2-201ENST00000600169 1863 ntBASIC19.4■□□□□ 0.7
O00370 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms