Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM235A6NFC5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM235A6NFC5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.6■□□□□ 0.09
TMEM235A6NFC5 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TMEM235A6NFC5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 AC006116.8-202ENST00000587620 1550 ntBASIC15.59■□□□□ 0.09
TMEM235A6NFC5 AC084018.2-201ENST00000613093 2607 ntBASIC15.59■□□□□ 0.09
TMEM235A6NFC5 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 AC008403.3-201ENST00000598924 454 ntBASIC15.59■□□□□ 0.09
TMEM235A6NFC5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TMEM235A6NFC5 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.58■□□□□ 0.09
TMEM235A6NFC5 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM235A6NFC5 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM235A6NFC5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
TMEM235A6NFC5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM235A6NFC5 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TMEM235A6NFC5 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 AP000593.1-201ENST00000393668 712 ntBASIC15.58■□□□□ 0.08
TMEM235A6NFC5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 KRASP1-201ENST00000407852 552 ntBASIC15.58■□□□□ 0.08
TMEM235A6NFC5 AC239809.2-201ENST00000415381 517 ntBASIC15.58■□□□□ 0.08
TMEM235A6NFC5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 AL023875.1-201ENST00000640777 796 ntBASIC15.58■□□□□ 0.08
TMEM235A6NFC5 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
TMEM235A6NFC5 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 AC004951.3-201ENST00000418645 1148 ntBASIC15.57■□□□□ 0.08
TMEM235A6NFC5 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 AC233263.1-201ENST00000578059 224 ntBASIC15.57■□□□□ 0.08
TMEM235A6NFC5 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC15.57■□□□□ 0.08
TMEM235A6NFC5 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms