Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 AC064862.7-201ENST00000604520 867 ntBASIC15.96■□□□□ 0.15
MBD3L4A6NDZ8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L4A6NDZ8 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
MBD3L4A6NDZ8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.96■□□□□ 0.15
MBD3L4A6NDZ8 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L4A6NDZ8 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
MBD3L4A6NDZ8 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC15.96■□□□□ 0.14
MBD3L4A6NDZ8 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
MBD3L4A6NDZ8 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
MBD3L4A6NDZ8 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
MBD3L4A6NDZ8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
MBD3L4A6NDZ8 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 RBM17P3-201ENST00000417687 1192 ntBASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 TP73-AS1-207ENST00000624167 988 ntBASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 AC132938.6-201ENST00000623828 1655 ntBASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
MBD3L4A6NDZ8 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 AC008608.2-201ENST00000606089 416 ntBASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
MBD3L4A6NDZ8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 PENK-208ENST00000523051 772 ntTSL 5 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 AL355877.3-201ENST00000622820 899 ntBASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
MBD3L4A6NDZ8 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms