Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 MIR662-201ENST00000384847 95 ntBASIC17.32■□□□□ 0.36
LRIT2A6NDA9 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 AL671277.2-201ENST00000458060 996 ntBASIC17.32■□□□□ 0.36
LRIT2A6NDA9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 AC113404.2-201ENST00000507884 177 ntBASIC17.32■□□□□ 0.36
LRIT2A6NDA9 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LRIT2A6NDA9 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 AC083849.1-201ENST00000615227 514 ntBASIC17.31■□□□□ 0.36
LRIT2A6NDA9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
LRIT2A6NDA9 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 SPDYE13P-201ENST00000445314 798 ntBASIC17.3■□□□□ 0.36
LRIT2A6NDA9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 ZNF444P1-201ENST00000559497 298 ntBASIC17.3■□□□□ 0.36
LRIT2A6NDA9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 AC138028.4-201ENST00000564984 1845 ntBASIC17.3■□□□□ 0.36
LRIT2A6NDA9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
LRIT2A6NDA9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LRIT2A6NDA9 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms