Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 RCC2P3-201ENST00000418112 1537 ntBASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC130371.2-201ENST00000619443 611 ntBASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF103-CHMP3A0A140T963 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 AL135905.2-201ENST00000584934 1404 ntBASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
RNF103-CHMP3A0A140T963 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 AL357033.4-201ENST00000617703 1807 ntBASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.58■□□□□ 0.4
RNF103-CHMP3A0A140T963 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 FSCN1P1-201ENST00000568912 1481 ntBASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 MYC-208ENST00000641036 567 ntBASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
RNF103-CHMP3A0A140T963 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
RNF103-CHMP3A0A140T963 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms