Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 KRT18P65-201ENST00000439811 1286 ntBASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 FAM86EP-206ENST00000510506 987 ntBASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC005332.3-201ENST00000589904 676 ntBASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV5-4A0A0C4DH59 AL353692.3-201ENST00000407031 1396 ntBASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV5-4A0A0C4DH59 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC005332.1-201ENST00000577698 1310 ntBASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 Z83836.1-201ENST00000624605 1642 ntBASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV5-4A0A0C4DH59 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV5-4A0A0C4DH59 AC007613.1-201ENST00000572811 2597 ntBASIC17.89■□□□□ 0.46
TRBV5-4A0A0C4DH59 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV5-4A0A0C4DH59 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV5-4A0A0C4DH59 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV5-4A0A0C4DH59 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms