Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 AC005332.1-201ENST00000577698 1310 ntBASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 AC093677.2-201ENST00000600169 1863 ntBASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 AL024508.2-201ENST00000607749 1894 ntBASIC16.59■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TNFSF12-TNFSF13A0A0A6YY99 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ZNF444P1-201ENST00000559497 298 ntBASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AL136038.3-201ENST00000561909 1096 ntBASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AL136038.4-201ENST00000603606 1261 ntBASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC079602.3-201ENST00000623931 403 ntBASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 IER3-202ENST00000376377 1350 ntBASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 LINC01126-201ENST00000623515 1646 ntBASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC135776.1-201ENST00000319817 2481 ntBASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AL391807.1-203ENST00000604392 2365 ntBASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC135050.7-201ENST00000624508 2218 ntBASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 LINC01311-201ENST00000565162 1445 ntBASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 AC116407.4-201ENST00000623319 1061 ntBASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TNFSF12-TNFSF13A0A0A6YY99 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms