Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 LINC00896-202ENST00000609602 2128 ntBASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 MIR1238-201ENST00000408483 83 ntBASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
TRAV27A0A087WT01 AC092338.2-201ENST00000568827 1415 ntBASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 SLC25A6P5-201ENST00000435663 894 ntBASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CCR12P-201ENST00000446203 998 ntBASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 FITM1-202ENST00000559294 800 ntBASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 WWOX-216ENST00000569818 525 ntBASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TRAV27A0A087WT01 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 SNORA78-201ENST00000459373 127 ntBASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.52■□□□□ 0.24
TRAV27A0A087WT01 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.52■□□□□ 0.23
TRAV27A0A087WT01 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms