Protein–RNA interactions for Protein: A0A087WSY6

IGKV3D-15, Immunoglobulin kappa variable 3D-15, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-15A0A087WSY6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
IGKV3D-15A0A087WSY6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
IGKV3D-15A0A087WSY6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 AP002383.4-201ENST00000442518 975 ntBASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 AL353801.3-201ENST00000609898 542 ntBASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 AL592071.1-201ENST00000611956 408 ntBASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
IGKV3D-15A0A087WSY6 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 DRAXINP1-201ENST00000437611 948 ntBASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 IGHV3-41-201ENST00000613121 348 ntBASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.03■□□□□ 0.16
IGKV3D-15A0A087WSY6 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.02■□□□□ 0.16
IGKV3D-15A0A087WSY6 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
IGKV3D-15A0A087WSY6 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.02■□□□□ 0.16
IGKV3D-15A0A087WSY6 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms