Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 AC108751.1-201ENST00000490852 363 ntBASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 SPCS2P1-201ENST00000561636 679 ntBASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 AC009154.2-201ENST00000621177 724 ntBASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.53■□□□□ 0.88
PTCH2Q9Y6C5 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 HLA-J-203ENST00000494367 1087 ntBASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 MIR1199-201ENST00000621445 119 ntBASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 AC005593.1-201ENST00000624894 515 ntBASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
PTCH2Q9Y6C5 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.52■□□□□ 0.87
PTCH2Q9Y6C5 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 AC092865.6-201ENST00000642101 219 ntBASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PTCH2Q9Y6C5 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 AC002310.6-201ENST00000624451 1377 ntBASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 KRT18P27-201ENST00000427733 1299 ntBASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 BX005266.1-201ENST00000473402 457 ntBASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCH2Q9Y6C5 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
PTCH2Q9Y6C5 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms