Protein–RNA interactions for Protein: Q9Y5I7

CLDN16, Claudin-16, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN16Q9Y5I7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CLDN16Q9Y5I7 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 AL592071.1-201ENST00000611956 408 ntBASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CLDN16Q9Y5I7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DRAXINP1-201ENST00000437611 948 ntBASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 AC068472.1-201ENST00000474589 881 ntBASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DUTP2-201ENST00000519164 463 ntBASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 TPSP2-201ENST00000561760 610 ntBASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.92■□□□□ 0.3
CLDN16Q9Y5I7 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 REXO1L9P-201ENST00000604264 2108 ntBASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.91■□□□□ 0.3
CLDN16Q9Y5I7 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms