Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
LRCH1Q9Y2L9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 AC008741.2-201ENST00000612792 3115 ntBASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 AL162412.1-201ENST00000567129 965 ntBASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 AC133552.2-202ENST00000575694 574 ntBASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 AGGF1P2-201ENST00000426656 2106 ntBASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 TFP1-202ENST00000475455 1573 ntBASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LRCH1Q9Y2L9 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 CYP2T1P-201ENST00000432607 1285 ntBASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 AF201337.1-201ENST00000520239 748 ntBASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 AC069236.1-201ENST00000604339 616 ntBASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 AC008694.1-202ENST00000636953 945 ntBASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 AC068338.2-201ENST00000563278 1430 ntBASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.35■□□□□ 0.37
LRCH1Q9Y2L9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 LINC02199-201ENST00000506655 2702 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 AC068418.2-201ENST00000577309 3703 ntBASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LRCH1Q9Y2L9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms