Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SHANK2Q9UPX8 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SHANK2Q9UPX8 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 CSF3-203ENST00000394148 622 ntTSL 3 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 FABP5-202ENST00000396359 986 ntTSL 5 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
SHANK2Q9UPX8 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC27■■□□□ 1.91
SHANK2Q9UPX8 AL139424.1-201ENST00000607572 797 ntBASIC27■■□□□ 1.91
SHANK2Q9UPX8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 PMS2P2-201ENST00000425039 1128 ntBASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
SHANK2Q9UPX8 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 FUOM-202ENST00000368551 628 ntTSL 3 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 COX5A-204ENST00000567270 579 ntTSL 3 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC26.98■■□□□ 1.91
SHANK2Q9UPX8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 AC093909.1-201ENST00000504731 1122 ntBASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 AL356309.3-201ENST00000624132 1934 ntBASIC26.97■■□□□ 1.91
SHANK2Q9UPX8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 RAB17-203ENST00000409576 466 ntTSL 3 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 AL691403.2-201ENST00000618460 490 ntBASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 AP000867.4-201ENST00000641616 219 ntBASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 AC073592.3-201ENST00000625118 1834 ntBASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC26.96■■□□□ 1.91
SHANK2Q9UPX8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 AC010460.3-201ENST00000511359 1579 ntBASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 CD63-204ENST00000546939 779 ntTSL 3 BASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 AC012640.2-201ENST00000561606 901 ntBASIC26.95■■□□□ 1.91
SHANK2Q9UPX8 TERC-201ENST00000602385 541 ntBASIC26.95■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms