Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19■□□□□ 0.63
DNMT3BQ9UBC3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 AF186996.4-201ENST00000467186 377 ntBASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 AL499627.1-201ENST00000569373 2188 ntBASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNMT3BQ9UBC3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 MIR574-201ENST00000385209 96 ntBASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 MTCL1P1-201ENST00000446207 792 ntBASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 SLC25A1P1-201ENST00000528351 927 ntBASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.98■□□□□ 0.63
DNMT3BQ9UBC3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 AC009154.2-201ENST00000621177 724 ntBASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 AL355877.3-201ENST00000622820 899 ntBASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
DNMT3BQ9UBC3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNMT3BQ9UBC3 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNMT3BQ9UBC3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNMT3BQ9UBC3 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms