Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AC008556.1-201ENST00000610908 2040 ntBASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 AC096733.2-201ENST00000609937 1394 ntBASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 OR6D1P-203ENST00000641209 4860 ntBASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LIN7CQ9NUP9 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AC097488.1-201ENST00000507834 756 ntBASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SLC25A1P4-201ENST00000567977 778 ntBASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AP005242.2-201ENST00000580065 1175 ntBASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.19■□□□□ 0.02
LIN7CQ9NUP9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 AC008040.2-201ENST00000461049 708 ntBASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 KRT18P41-201ENST00000518924 1277 ntBASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 AC134043.2-201ENST00000624206 2238 ntBASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
LIN7CQ9NUP9 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms