Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AL441883.1-201ENST00000566170 1045 ntBASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 AC140113.3-201ENST00000605663 199 ntBASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.51■□□□□ 0.39
NECTIN3Q9NQS3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 AC067852.2-201ENST00000590513 2313 ntBASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NECTIN3Q9NQS3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 GCSHP2-201ENST00000560971 527 ntBASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 AL049597.2-201ENST00000565575 961 ntBASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 AC139713.2-201ENST00000641328 2723 ntBASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NECTIN3Q9NQS3 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NECTIN3Q9NQS3 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms