Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 HLA-DQB1-201ENST00000374943 1656 ntBASIC16.51■□□□□ 0.23
HINT3Q9NQE9 FSCN1P1-201ENST00000568912 1481 ntBASIC16.51■□□□□ 0.23
HINT3Q9NQE9 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AC116562.2-201ENST00000507042 360 ntBASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AL355075.4-201ENST00000554988 638 ntBASIC16.51■□□□□ 0.23
HINT3Q9NQE9 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HINT3Q9NQE9 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 AC034236.2-201ENST00000606662 1610 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 MESTP1-201ENST00000404287 994 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 MCCD1P1-208ENST00000445732 328 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 GXYLT1P3-201ENST00000453058 1193 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 AP000692.2-201ENST00000608391 879 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 REXO1L10P-201ENST00000615707 1290 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 REXO1L12P-201ENST00000622156 912 ntBASIC16.5■□□□□ 0.23
HINT3Q9NQE9 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.5■□□□□ 0.23
HINT3Q9NQE9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 BX088651.1-201ENST00000540551 451 ntBASIC16.49■□□□□ 0.23
HINT3Q9NQE9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 AC073912.3-201ENST00000624414 853 ntBASIC16.49■□□□□ 0.23
HINT3Q9NQE9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
HINT3Q9NQE9 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 AC012317.2-201ENST00000623305 2251 ntBASIC16.48■□□□□ 0.23
HINT3Q9NQE9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 UNC93B2-201ENST00000285383 730 ntBASIC16.48■□□□□ 0.23
HINT3Q9NQE9 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.48■□□□□ 0.23
HINT3Q9NQE9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms