Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SLC52A3Q9NQ40 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC17.27■□□□□ 0.35
SLC52A3Q9NQ40 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SLC52A3Q9NQ40 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
SLC52A3Q9NQ40 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 CR769767.2-201ENST00000622735 460 ntBASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SLC52A3Q9NQ40 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 AL138688.1-201ENST00000624851 1594 ntBASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 AC104390.1-201ENST00000555663 520 ntBASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 REXO1L10P-201ENST00000615707 1290 ntBASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 REXO1L12P-201ENST00000622156 912 ntBASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SLC52A3Q9NQ40 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 AL135905.2-201ENST00000584934 1404 ntBASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 AC133963.1-201ENST00000504166 1679 ntBASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SLC52A3Q9NQ40 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SLC52A3Q9NQ40 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms