Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AL157888.1-201ENST00000631930 593 ntBASIC15.98■□□□□ 0.15
CDH20Q9HBT6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.98■□□□□ 0.15
CDH20Q9HBT6 AC009102.3-201ENST00000623118 1491 ntBASIC15.97■□□□□ 0.15
CDH20Q9HBT6 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 RASA4DP-201ENST00000460726 1199 ntBASIC15.97■□□□□ 0.15
CDH20Q9HBT6 AC063952.2-201ENST00000498792 1227 ntBASIC15.97■□□□□ 0.15
CDH20Q9HBT6 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 AC022616.7-201ENST00000525383 220 ntBASIC15.97■□□□□ 0.15
CDH20Q9HBT6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
CDH20Q9HBT6 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 STARP1-201ENST00000397973 869 ntBASIC15.96■□□□□ 0.15
CDH20Q9HBT6 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
CDH20Q9HBT6 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH20Q9HBT6 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
CDH20Q9HBT6 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.96■□□□□ 0.14
CDH20Q9HBT6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 FAM8A6P-201ENST00000407496 1135 ntBASIC15.95■□□□□ 0.14
CDH20Q9HBT6 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
CDH20Q9HBT6 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms