Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
UPF2Q9HAU5 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.42■■□□□ 1.18
UPF2Q9HAU5 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 KRASP1-201ENST00000407852 552 ntBASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AC004951.3-201ENST00000418645 1148 ntBASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AC091390.4-202ENST00000476426 537 ntBASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 GAMT-205ENST00000640762 751 ntTSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
UPF2Q9HAU5 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 AC008403.3-201ENST00000598924 454 ntBASIC22.41■■□□□ 1.18
UPF2Q9HAU5 AL109923.1-201ENST00000618799 583 ntBASIC22.41■■□□□ 1.18
UPF2Q9HAU5 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC22.41■■□□□ 1.18
UPF2Q9HAU5 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 NIFKP9-201ENST00000419265 221 ntBASIC22.4■■□□□ 1.18
UPF2Q9HAU5 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AL023875.1-201ENST00000640777 796 ntBASIC22.4■■□□□ 1.18
UPF2Q9HAU5 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC22.4■■□□□ 1.18
UPF2Q9HAU5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
UPF2Q9HAU5 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.18
UPF2Q9HAU5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC22.39■■□□□ 1.18
UPF2Q9HAU5 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
UPF2Q9HAU5 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
UPF2Q9HAU5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
UPF2Q9HAU5 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UPF2Q9HAU5 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
UPF2Q9HAU5 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
UPF2Q9HAU5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms