Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 YBX1P10-201ENST00000444752 975 ntBASIC17.4■□□□□ 0.38
VCX3BQ9H321 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 RCC2P6-201ENST00000526625 1557 ntBASIC17.4■□□□□ 0.38
VCX3BQ9H321 FLJ38576-201ENST00000623820 2459 ntBASIC17.4■□□□□ 0.38
VCX3BQ9H321 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VCX3BQ9H321 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.4■□□□□ 0.38
VCX3BQ9H321 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
VCX3BQ9H321 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
VCX3BQ9H321 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
VCX3BQ9H321 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 EDA-201ENST00000338901 1233 ntBASIC17.39■□□□□ 0.37
VCX3BQ9H321 AC007322.4-201ENST00000509611 723 ntBASIC17.39■□□□□ 0.37
VCX3BQ9H321 RARRES2P4-201ENST00000514074 484 ntBASIC17.39■□□□□ 0.37
VCX3BQ9H321 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 MYCNOS-205ENST00000641950 531 ntBASIC17.39■□□□□ 0.37
VCX3BQ9H321 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.39■□□□□ 0.37
VCX3BQ9H321 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VCX3BQ9H321 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.38■□□□□ 0.37
VCX3BQ9H321 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 COX20-201ENST00000366528 568 ntTSL 2 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 UBE2DNL-204ENST00000602536 740 ntBASIC17.38■□□□□ 0.37
VCX3BQ9H321 AC068587.9-201ENST00000641814 219 ntBASIC17.38■□□□□ 0.37
VCX3BQ9H321 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.38■□□□□ 0.37
VCX3BQ9H321 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
VCX3BQ9H321 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 STK24-203ENST00000397517 4578 ntTSL 2 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
VCX3BQ9H321 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
VCX3BQ9H321 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms