Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 AK1-201ENST00000223836 736 ntTSL 3 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
NKX6-2Q9C056 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AC007322.4-201ENST00000509611 723 ntBASIC14.8□□□□□ -0.04
NKX6-2Q9C056 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AL031432.3-201ENST00000607698 485 ntBASIC14.8□□□□□ -0.04
NKX6-2Q9C056 MYCNOS-205ENST00000641950 531 ntBASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AC008406.3-201ENST00000620001 1374 ntBASIC14.8□□□□□ -0.04
NKX6-2Q9C056 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AC018553.1-201ENST00000616682 1458 ntBASIC14.8□□□□□ -0.04
NKX6-2Q9C056 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AC116351.2-201ENST00000606540 1585 ntBASIC14.8□□□□□ -0.04
NKX6-2Q9C056 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
NKX6-2Q9C056 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 KRT18P68-201ENST00000392293 1000 ntBASIC14.79□□□□□ -0.04
NKX6-2Q9C056 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 FLYWCH1P1-201ENST00000460917 1874 ntBASIC14.79□□□□□ -0.04
NKX6-2Q9C056 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 SUDS3P1-201ENST00000505831 966 ntBASIC14.79□□□□□ -0.04
NKX6-2Q9C056 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
NKX6-2Q9C056 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
NKX6-2Q9C056 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
NKX6-2Q9C056 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms