Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 AL136317.3-201ENST00000618497 906 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 AC009154.2-201ENST00000621177 724 ntBASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRFN3Q9BTN0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 GALT-202ENST00000450095 1280 ntTSL 2 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 REXO1L3P-201ENST00000622202 1288 ntBASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AC073592.4-201ENST00000623827 446 ntBASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AC009093.7-201ENST00000623853 1223 ntBASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 KRT8P32-201ENST00000512863 1461 ntBASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AC006504.4-201ENST00000592118 1568 ntBASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRFN3Q9BTN0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AC025580.3-201ENST00000617932 1424 ntBASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AC008687.5-201ENST00000593746 558 ntBASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AC008667.4-201ENST00000607370 168 ntBASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AL662799.1-202ENST00000614205 422 ntBASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 AC004706.3-202ENST00000621574 984 ntBASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
LRFN3Q9BTN0 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 U91328.1-201ENST00000437528 223 ntBASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 KRT17P7-201ENST00000451704 1104 ntBASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 GPR53P-205ENST00000457298 1084 ntBASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 SLC25A39P2-201ENST00000537614 270 ntBASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 SPDYE22P-201ENST00000582158 798 ntBASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
LRFN3Q9BTN0 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
LRFN3Q9BTN0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms