Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC20.83■□□□□ 0.93
PTPN18Q99952 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN18Q99952 AL158211.5-201ENST00000623583 2518 ntBASIC20.83■□□□□ 0.92
PTPN18Q99952 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN18Q99952 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN18Q99952 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN18Q99952 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN18Q99952 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.83■□□□□ 0.92
PTPN18Q99952 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PTPN18Q99952 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.83■□□□□ 0.92
PTPN18Q99952 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
PTPN18Q99952 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
PTPN18Q99952 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
PTPN18Q99952 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.82■□□□□ 0.92
PTPN18Q99952 MYLKP1-201ENST00000509077 1580 ntBASIC20.82■□□□□ 0.92
PTPN18Q99952 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.82■□□□□ 0.92
PTPN18Q99952 HTR5BP-201ENST00000430851 1154 ntBASIC20.82■□□□□ 0.92
PTPN18Q99952 AC108751.1-201ENST00000490852 363 ntBASIC20.82■□□□□ 0.92
PTPN18Q99952 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN18Q99952 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 AC092865.6-201ENST00000642101 219 ntBASIC20.82■□□□□ 0.92
PTPN18Q99952 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.82■□□□□ 0.92
PTPN18Q99952 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PTPN18Q99952 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTPN18Q99952 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN18Q99952 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
PTPN18Q99952 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN18Q99952 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 SNHG9-202ENST00000564014 471 ntBASIC20.81■□□□□ 0.92
PTPN18Q99952 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
PTPN18Q99952 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN18Q99952 SDCCAG3P1-201ENST00000589292 1150 ntBASIC20.81■□□□□ 0.92
PTPN18Q99952 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.81■□□□□ 0.92
PTPN18Q99952 AL022326.1-202ENST00000641533 845 ntBASIC20.81■□□□□ 0.92
PTPN18Q99952 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN18Q99952 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.81■□□□□ 0.92
PTPN18Q99952 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.81■□□□□ 0.92
PTPN18Q99952 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PTPN18Q99952 AC097374.2-201ENST00000618617 1306 ntBASIC20.8■□□□□ 0.92
PTPN18Q99952 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN18Q99952 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN18Q99952 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN18Q99952 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN18Q99952 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PTPN18Q99952 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.8■□□□□ 0.92
PTPN18Q99952 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN18Q99952 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN18Q99952 ETFA-208ENST00000559602 792 ntTSL 3 BASIC20.8■□□□□ 0.92
PTPN18Q99952 AC005593.1-201ENST00000624894 515 ntBASIC20.8■□□□□ 0.92
PTPN18Q99952 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC20.8■□□□□ 0.92
PTPN18Q99952 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
PTPN18Q99952 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PTPN18Q99952 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC20.8■□□□□ 0.92
PTPN18Q99952 PMPCAP1-201ENST00000508114 1576 ntBASIC20.8■□□□□ 0.92
PTPN18Q99952 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
PTPN18Q99952 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.79■□□□□ 0.92
PTPN18Q99952 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
PTPN18Q99952 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN18Q99952 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN18Q99952 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN18Q99952 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.79■□□□□ 0.92
PTPN18Q99952 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PTPN18Q99952 AC254562.1-201ENST00000417586 456 ntBASIC20.79■□□□□ 0.92
PTPN18Q99952 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
PTPN18Q99952 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.79■□□□□ 0.92
PTPN18Q99952 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms