Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
TIMP4Q99727 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMP4Q99727 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMP4Q99727 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP4Q99727 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP4Q99727 SPDYE13P-201ENST00000445314 798 ntBASIC16.74■□□□□ 0.27
TIMP4Q99727 AC104390.1-201ENST00000555663 520 ntBASIC16.74■□□□□ 0.27
TIMP4Q99727 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
TIMP4Q99727 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.74■□□□□ 0.27
TIMP4Q99727 AL157888.1-201ENST00000631930 593 ntBASIC16.74■□□□□ 0.27
TIMP4Q99727 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.74■□□□□ 0.27
TIMP4Q99727 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
TIMP4Q99727 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP4Q99727 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.74■□□□□ 0.27
TIMP4Q99727 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP4Q99727 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP4Q99727 AC034236.2-201ENST00000606662 1610 ntBASIC16.74■□□□□ 0.27
TIMP4Q99727 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP4Q99727 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.74■□□□□ 0.27
TIMP4Q99727 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
TIMP4Q99727 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
TIMP4Q99727 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 HEIH-201ENST00000623091 1652 ntBASIC16.73■□□□□ 0.27
TIMP4Q99727 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TIMP4Q99727 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
TIMP4Q99727 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.73■□□□□ 0.27
TIMP4Q99727 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
TIMP4Q99727 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
TIMP4Q99727 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.73■□□□□ 0.27
TIMP4Q99727 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
TIMP4Q99727 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP4Q99727 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP4Q99727 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP4Q99727 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.72■□□□□ 0.27
TIMP4Q99727 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
TIMP4Q99727 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
TIMP4Q99727 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.72■□□□□ 0.27
TIMP4Q99727 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 MTMR9LP-203ENST00000426597 1545 ntBASIC16.72■□□□□ 0.27
TIMP4Q99727 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP4Q99727 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
TIMP4Q99727 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
TIMP4Q99727 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.72■□□□□ 0.27
TIMP4Q99727 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.72■□□□□ 0.27
TIMP4Q99727 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.72■□□□□ 0.27
TIMP4Q99727 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
TIMP4Q99727 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms