Protein–RNA interactions for Protein: Q96NG5

ZNF558, Zinc finger protein 558, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558Q96NG5 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ZNF558Q96NG5 AP005117.1-201ENST00000584346 1413 ntBASIC19.34■□□□□ 0.69
ZNF558Q96NG5 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 LINC01126-201ENST00000623515 1646 ntBASIC19.34■□□□□ 0.69
ZNF558Q96NG5 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 ABCD1P5-201ENST00000445663 754 ntBASIC19.34■□□□□ 0.69
ZNF558Q96NG5 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
ZNF558Q96NG5 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 ZNF259P1-201ENST00000407656 1365 ntBASIC19.33■□□□□ 0.69
ZNF558Q96NG5 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.33■□□□□ 0.69
ZNF558Q96NG5 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 TERC-201ENST00000602385 541 ntBASIC19.33■□□□□ 0.68
ZNF558Q96NG5 AC116407.3-201ENST00000623905 1129 ntBASIC19.33■□□□□ 0.68
ZNF558Q96NG5 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 AC005332.7-201ENST00000614046 2005 ntBASIC19.33■□□□□ 0.68
ZNF558Q96NG5 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 AL499627.1-201ENST00000569373 2188 ntBASIC19.33■□□□□ 0.68
ZNF558Q96NG5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ZNF558Q96NG5 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 PMS2P7-201ENST00000506558 1336 ntBASIC19.32■□□□□ 0.68
ZNF558Q96NG5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 MIR940-201ENST00000401276 94 ntBASIC19.32■□□□□ 0.68
ZNF558Q96NG5 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 AC092865.5-201ENST00000545435 363 ntBASIC19.32■□□□□ 0.68
ZNF558Q96NG5 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 AC021087.4-201ENST00000563761 564 ntBASIC19.32■□□□□ 0.68
ZNF558Q96NG5 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.32■□□□□ 0.68
ZNF558Q96NG5 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ZNF558Q96NG5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms