Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
CMTM3Q96MX0 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 AL355312.1-201ENST00000407115 2176 ntBASIC15.7■□□□□ 0.1
CMTM3Q96MX0 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 OAS3-207ENST00000551007 998 ntTSL 2 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CMTM3Q96MX0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 AC034236.2-201ENST00000606662 1610 ntBASIC15.69■□□□□ 0.1
CMTM3Q96MX0 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 Six3os1_6.1-201ENST00000620790 196 ntBASIC15.69■□□□□ 0.1
CMTM3Q96MX0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CMTM3Q96MX0 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 KRT8P50-201ENST00000562022 1438 ntBASIC15.68■□□□□ 0.1
CMTM3Q96MX0 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC15.68■□□□□ 0.1
CMTM3Q96MX0 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms