Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.82■□□□□ 0.6
C9orf72Q96LT7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 SLC25A6P5-201ENST00000435663 894 ntBASIC18.81■□□□□ 0.6
C9orf72Q96LT7 AC008040.2-201ENST00000461049 708 ntBASIC18.81■□□□□ 0.6
C9orf72Q96LT7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 AC026271.3-201ENST00000571884 352 ntBASIC18.81■□□□□ 0.6
C9orf72Q96LT7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
C9orf72Q96LT7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 MIR1238-201ENST00000408483 83 ntBASIC18.8■□□□□ 0.6
C9orf72Q96LT7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CKBP1-201ENST00000565489 1086 ntBASIC18.8■□□□□ 0.6
C9orf72Q96LT7 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.8■□□□□ 0.6
C9orf72Q96LT7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 FSCN1P1-201ENST00000568912 1481 ntBASIC18.79■□□□□ 0.6
C9orf72Q96LT7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 AC011298.2-201ENST00000617989 482 ntBASIC18.79■□□□□ 0.6
C9orf72Q96LT7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 AL096828.2-201ENST00000567259 1965 ntBASIC18.79■□□□□ 0.6
C9orf72Q96LT7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
C9orf72Q96LT7 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms