Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.64■□□□□ 0.73
SNX27Q96L92 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
SNX27Q96L92 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SNX27Q96L92 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.64■□□□□ 0.73
SNX27Q96L92 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 LINC00602-201ENST00000629776 2065 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 AC120498.9-201ENST00000339021 3867 ntBASIC19.64■□□□□ 0.73
SNX27Q96L92 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SNX27Q96L92 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNX27Q96L92 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX27Q96L92 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
SNX27Q96L92 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.63■□□□□ 0.73
SNX27Q96L92 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.63■□□□□ 0.73
SNX27Q96L92 AC091607.1-201ENST00000490318 1060 ntBASIC19.63■□□□□ 0.73
SNX27Q96L92 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX27Q96L92 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX27Q96L92 AP005901.3-202ENST00000581653 237 ntBASIC19.63■□□□□ 0.73
SNX27Q96L92 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.63■□□□□ 0.73
SNX27Q96L92 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.63■□□□□ 0.73
SNX27Q96L92 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SNX27Q96L92 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SNX27Q96L92 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SNX27Q96L92 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SNX27Q96L92 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SNX27Q96L92 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX27Q96L92 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
SNX27Q96L92 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX27Q96L92 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX27Q96L92 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.62■□□□□ 0.73
SNX27Q96L92 AL671883.3-201ENST00000603274 991 ntBASIC19.62■□□□□ 0.73
SNX27Q96L92 AL353801.3-201ENST00000609898 542 ntBASIC19.62■□□□□ 0.73
SNX27Q96L92 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX27Q96L92 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.62■□□□□ 0.73
SNX27Q96L92 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SNX27Q96L92 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX27Q96L92 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
SNX27Q96L92 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
SNX27Q96L92 NUS1P1-201ENST00000446295 882 ntBASIC19.61■□□□□ 0.73
SNX27Q96L92 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 HLA-J-202ENST00000469281 1241 ntBASIC19.61■□□□□ 0.73
SNX27Q96L92 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX27Q96L92 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.61■□□□□ 0.73
SNX27Q96L92 Z69720.1-201ENST00000601483 472 ntBASIC19.61■□□□□ 0.73
SNX27Q96L92 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX27Q96L92 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.61■□□□□ 0.73
SNX27Q96L92 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.61■□□□□ 0.73
SNX27Q96L92 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SNX27Q96L92 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.61■□□□□ 0.73
SNX27Q96L92 AC087289.5-201ENST00000586076 3175 ntBASIC19.6■□□□□ 0.73
SNX27Q96L92 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX27Q96L92 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 AL138781.2-201ENST00000617896 1843 ntBASIC19.6■□□□□ 0.73
SNX27Q96L92 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC19.6■□□□□ 0.73
SNX27Q96L92 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SNX27Q96L92 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms