Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 RCC2P3-201ENST00000418112 1537 ntBASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 AC120498.8-201ENST00000614275 531 ntBASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 MDK-213ENST00000617138 635 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 CROCCP2-202ENST00000412962 2773 ntBASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 AC092368.3-202ENST00000574180 1591 ntBASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLPTM1LQ96KA5 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 AC004911.1-201ENST00000416316 871 ntBASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 ABHD17AP6-201ENST00000458502 1044 ntBASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.52■□□□□ 0.4
CLPTM1LQ96KA5 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CLPTM1LQ96KA5 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 AC011270.2-201ENST00000624293 2550 ntBASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 PKD1P1-201ENST00000458669 6805 ntBASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CLPTM1LQ96KA5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.5■□□□□ 0.39
CLPTM1LQ96KA5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
CLPTM1LQ96KA5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms