Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CHAMP1Q96JM3 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 AC142381.4-202ENST00000563973 229 ntBASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 AC073195.1-201ENST00000607241 877 ntBASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CHAMP1Q96JM3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 AC036111.1-201ENST00000533973 1582 ntBASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 GCSHP5-201ENST00000443090 522 ntBASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 MCCD1P1-208ENST00000445732 328 ntBASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC21.16■□□□□ 0.98
CHAMP1Q96JM3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CHAMP1Q96JM3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.14■□□□□ 0.98
CHAMP1Q96JM3 PRORSD1P-202ENST00000563365 2154 ntBASIC21.14■□□□□ 0.98
CHAMP1Q96JM3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHAMP1Q96JM3 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHAMP1Q96JM3 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CHAMP1Q96JM3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CHAMP1Q96JM3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 AL359736.2-201ENST00000621992 437 ntBASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 TNRC18P3-201ENST00000441896 2691 ntBASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CHAMP1Q96JM3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CHAMP1Q96JM3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms