Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 AL022326.1-202ENST00000641533 845 ntBASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 CNN2P11-201ENST00000429351 262 ntBASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 AL157384.1-201ENST00000445995 2473 ntBASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 AC004817.3-201ENST00000602957 2129 ntBASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRIM43Q96BQ3 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 SLC4A1APP2-201ENST00000424054 1259 ntBASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 KRT18P65-201ENST00000439811 1286 ntBASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 AP002472.1-201ENST00000577490 586 ntBASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 PGM5P2-202ENST00000637225 1043 ntBASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRIM43Q96BQ3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 SYS1-203ENST00000414310 795 ntTSL 3 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 WDR53-203ENST00000429115 683 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AC112698.1-201ENST00000510299 916 ntBASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AC006557.2-201ENST00000592985 1240 ntBASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AC106028.4-201ENST00000614509 607 ntBASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 AC002310.6-201ENST00000624451 1377 ntBASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
TRIM43Q96BQ3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRIM43Q96BQ3 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms