Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC20.61■□□□□ 0.89
USP6NLQ92738 AC098831.1-202ENST00000438821 336 ntBASIC20.61■□□□□ 0.89
USP6NLQ92738 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC20.61■□□□□ 0.89
USP6NLQ92738 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6NLQ92738 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6NLQ92738 AL691403.2-201ENST00000618460 490 ntBASIC20.61■□□□□ 0.89
USP6NLQ92738 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.61■□□□□ 0.89
USP6NLQ92738 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.61■□□□□ 0.89
USP6NLQ92738 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
USP6NLQ92738 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
USP6NLQ92738 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.61■□□□□ 0.89
USP6NLQ92738 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6NLQ92738 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6NLQ92738 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6NLQ92738 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6NLQ92738 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6NLQ92738 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
USP6NLQ92738 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6NLQ92738 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.6■□□□□ 0.89
USP6NLQ92738 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6NLQ92738 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
USP6NLQ92738 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.6■□□□□ 0.89
USP6NLQ92738 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.6■□□□□ 0.89
USP6NLQ92738 UPF3AP3-201ENST00000420996 769 ntBASIC20.6■□□□□ 0.89
USP6NLQ92738 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6NLQ92738 AL591424.1-201ENST00000442569 1213 ntBASIC20.6■□□□□ 0.89
USP6NLQ92738 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
USP6NLQ92738 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.6■□□□□ 0.89
USP6NLQ92738 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC20.6■□□□□ 0.89
USP6NLQ92738 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 HLA-J-201ENST00000462773 1622 ntBASIC20.6■□□□□ 0.89
USP6NLQ92738 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
USP6NLQ92738 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 AL356309.3-201ENST00000624132 1934 ntBASIC20.59■□□□□ 0.89
USP6NLQ92738 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.59■□□□□ 0.89
USP6NLQ92738 AL158211.5-201ENST00000623583 2518 ntBASIC20.59■□□□□ 0.89
USP6NLQ92738 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 RPSAP43-201ENST00000402237 625 ntBASIC20.59■□□□□ 0.89
USP6NLQ92738 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 GGCT-205ENST00000409436 954 ntTSL 3 BASIC20.59■□□□□ 0.89
USP6NLQ92738 MED15P5-201ENST00000423150 992 ntBASIC20.59■□□□□ 0.89
USP6NLQ92738 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC20.59■□□□□ 0.89
USP6NLQ92738 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.59■□□□□ 0.89
USP6NLQ92738 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.59■□□□□ 0.89
USP6NLQ92738 AC083906.6-201ENST00000641366 219 ntBASIC20.59■□□□□ 0.89
USP6NLQ92738 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.59■□□□□ 0.89
USP6NLQ92738 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.59■□□□□ 0.89
USP6NLQ92738 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.59■□□□□ 0.89
USP6NLQ92738 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
USP6NLQ92738 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
USP6NLQ92738 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
USP6NLQ92738 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.58■□□□□ 0.89
USP6NLQ92738 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
USP6NLQ92738 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.58■□□□□ 0.89
USP6NLQ92738 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.58■□□□□ 0.89
USP6NLQ92738 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
USP6NLQ92738 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.58■□□□□ 0.89
USP6NLQ92738 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC20.58■□□□□ 0.89
USP6NLQ92738 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
USP6NLQ92738 AC092910.1-201ENST00000482027 1129 ntBASIC20.58■□□□□ 0.89
USP6NLQ92738 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.58■□□□□ 0.89
USP6NLQ92738 RNA5SP415-201ENST00000517246 115 ntBASIC20.58■□□□□ 0.89
USP6NLQ92738 OR7E14P-202ENST00000530490 1290 ntBASIC20.58■□□□□ 0.89
USP6NLQ92738 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC20.58■□□□□ 0.89
USP6NLQ92738 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.58■□□□□ 0.89
USP6NLQ92738 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
USP6NLQ92738 Z83851.2-201ENST00000609564 659 ntBASIC20.58■□□□□ 0.89
USP6NLQ92738 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6NLQ92738 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
USP6NLQ92738 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.88
USP6NLQ92738 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.58■□□□□ 0.88
USP6NLQ92738 AL032819.2-201ENST00000624543 2162 ntBASIC20.58■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms