Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
COPS9Q8WXC6 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 MAX-217ENST00000557277 728 ntTSL 3 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 MYCNOS-205ENST00000641950 531 ntBASIC12.34□□□□□ -0.43
COPS9Q8WXC6 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
COPS9Q8WXC6 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC12.33□□□□□ -0.43
COPS9Q8WXC6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
COPS9Q8WXC6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
COPS9Q8WXC6 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
COPS9Q8WXC6 AC108860.2-201ENST00000562760 2183 ntBASIC12.33□□□□□ -0.44
COPS9Q8WXC6 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 AP006587.1-201ENST00000534129 1502 ntBASIC12.33□□□□□ -0.44
COPS9Q8WXC6 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 AC027612.3-201ENST00000413684 1047 ntBASIC12.33□□□□□ -0.44
COPS9Q8WXC6 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 RARRES2P4-201ENST00000514074 484 ntBASIC12.33□□□□□ -0.44
COPS9Q8WXC6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 KRT8P45-201ENST00000414328 1447 ntBASIC12.33□□□□□ -0.44
COPS9Q8WXC6 AC006116.8-202ENST00000587620 1550 ntBASIC12.33□□□□□ -0.44
COPS9Q8WXC6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
COPS9Q8WXC6 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.32□□□□□ -0.44
COPS9Q8WXC6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms