Protein–RNA interactions for Protein: Q8TD43

TRPM4, Transient receptor potential cation channel subfamily M member 4, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4Q8TD43 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 AC112698.1-201ENST00000510299 916 ntBASIC21.52■■□□□ 1.04
TRPM4Q8TD43 MIR4469-201ENST00000583919 79 ntBASIC21.52■■□□□ 1.04
TRPM4Q8TD43 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 MYLKP1-201ENST00000509077 1580 ntBASIC21.52■■□□□ 1.04
TRPM4Q8TD43 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.52■■□□□ 1.04
TRPM4Q8TD43 AC004817.3-201ENST00000602957 2129 ntBASIC21.52■■□□□ 1.03
TRPM4Q8TD43 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
TRPM4Q8TD43 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
TRPM4Q8TD43 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 AC079776.2-201ENST00000641154 1609 ntBASIC21.51■■□□□ 1.03
TRPM4Q8TD43 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 AC005829.1-201ENST00000570002 483 ntBASIC21.51■■□□□ 1.03
TRPM4Q8TD43 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRPM4Q8TD43 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 MIR1199-201ENST00000621445 119 ntBASIC21.5■■□□□ 1.03
TRPM4Q8TD43 AL022326.1-202ENST00000641533 845 ntBASIC21.5■■□□□ 1.03
TRPM4Q8TD43 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 AC097374.2-201ENST00000618617 1306 ntBASIC21.5■■□□□ 1.03
TRPM4Q8TD43 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 AL032819.2-201ENST00000624543 2162 ntBASIC21.5■■□□□ 1.03
TRPM4Q8TD43 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.5■■□□□ 1.03
TRPM4Q8TD43 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 SNHG9-202ENST00000564014 471 ntBASIC21.49■■□□□ 1.03
TRPM4Q8TD43 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 AC005593.1-201ENST00000624894 515 ntBASIC21.49■■□□□ 1.03
TRPM4Q8TD43 AC092865.6-201ENST00000642101 219 ntBASIC21.49■■□□□ 1.03
TRPM4Q8TD43 SNAI3-AS1-205ENST00000568633 2096 ntBASIC21.49■■□□□ 1.03
TRPM4Q8TD43 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRPM4Q8TD43 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRPM4Q8TD43 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms