Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 NEFHP1-201ENST00000412845 2629 ntBASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LPCAT1Q8NF37 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 AC135776.1-201ENST00000319817 2481 ntBASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 HBZP1-201ENST00000354915 429 ntBASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 MIR1224-201ENST00000408193 85 ntBASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.41■□□□□ 0.54
LPCAT1Q8NF37 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 HLA-F-220ENST00000434407 884 ntBASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 VENTXP5-201ENST00000523979 775 ntBASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 AC010331.1-201ENST00000611423 582 ntBASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
LPCAT1Q8NF37 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.39■□□□□ 0.54
LPCAT1Q8NF37 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC18.39■□□□□ 0.53
LPCAT1Q8NF37 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms