Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 AC009065.1-201ENST00000564055 1225 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 AP005242.2-201ENST00000580065 1175 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 REXO1L10P-201ENST00000615707 1290 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 REXO1L12P-201ENST00000622156 912 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 AC113410.3-201ENST00000623366 203 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 AL163051.1-201ENST00000569214 1512 ntBASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
VPS37AQ8NEZ2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 AC009102.3-201ENST00000623118 1491 ntBASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.41■□□□□ 0.38
VPS37AQ8NEZ2 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 HOXB1-202ENST00000577092 1414 ntBASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 MIR149-201ENST00000384879 89 ntBASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 SLC25A1P2-201ENST00000430693 912 ntBASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 GCSHP5-201ENST00000443090 522 ntBASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 TSPY17P-201ENST00000450329 467 ntBASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 AC026471.5-201ENST00000615068 467 ntBASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
VPS37AQ8NEZ2 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
VPS37AQ8NEZ2 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.39■□□□□ 0.38
VPS37AQ8NEZ2 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
VPS37AQ8NEZ2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 AL096828.2-201ENST00000567259 1965 ntBASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
VPS37AQ8NEZ2 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms