Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.75■□□□□ 0.43
HIPK4Q8NE63 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.75■□□□□ 0.43
HIPK4Q8NE63 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 AC022211.2-201ENST00000585075 2527 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 SLC25A6P5-201ENST00000435663 894 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 C1QL1P1-201ENST00000568105 661 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 AC142086.2-201ENST00000569753 217 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 HLA-A-209ENST00000638375 975 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 AC141586.5-201ENST00000624546 2050 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 NBPF21P-201ENST00000425093 1451 ntBASIC17.74■□□□□ 0.43
HIPK4Q8NE63 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HIPK4Q8NE63 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 MTMR9LP-203ENST00000426597 1545 ntBASIC17.73■□□□□ 0.43
HIPK4Q8NE63 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.73■□□□□ 0.43
HIPK4Q8NE63 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.73■□□□□ 0.43
HIPK4Q8NE63 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HIPK4Q8NE63 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms