Protein–RNA interactions for Protein: Q8NBW4

SLC38A9, Sodium-coupled neutral amino acid transporter 9, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A9Q8NBW4 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 AC008687.5-201ENST00000593746 558 ntBASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 LINC01711-201ENST00000598340 967 ntBASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.17■□□□□ 0.34
SLC38A9Q8NBW4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 AL031598.1-201ENST00000561511 1773 ntBASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 BMF-207ENST00000559701 630 ntTSL 3 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 BNIP3P18-201ENST00000593976 575 ntBASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
SLC38A9Q8NBW4 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 AKR1C7P-201ENST00000305623 895 ntBASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 AL160237.2-201ENST00000556165 472 ntBASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
SLC38A9Q8NBW4 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 AC126763.1-201ENST00000552015 2118 ntBASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 AC005336.2-201ENST00000593183 939 ntBASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
SLC38A9Q8NBW4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 CROCCP3-202ENST00000420820 1947 ntBASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SLC38A9Q8NBW4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms