Protein–RNA interactions for Protein: Q8N967

LRTM2, Leucine-rich repeat and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM2Q8N967 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 AL355312.1-201ENST00000407115 2176 ntBASIC14.92□□□□□ -0.02
LRTM2Q8N967 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
LRTM2Q8N967 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.92□□□□□ -0.02
LRTM2Q8N967 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 AC009102.3-201ENST00000623118 1491 ntBASIC14.91□□□□□ -0.02
LRTM2Q8N967 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 MIR149-201ENST00000384879 89 ntBASIC14.91□□□□□ -0.02
LRTM2Q8N967 AC004951.3-201ENST00000418645 1148 ntBASIC14.91□□□□□ -0.02
LRTM2Q8N967 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
LRTM2Q8N967 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
LRTM2Q8N967 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 AC006970.2-201ENST00000450065 779 ntBASIC14.9□□□□□ -0.02
LRTM2Q8N967 MTDHP1-201ENST00000605323 784 ntBASIC14.9□□□□□ -0.02
LRTM2Q8N967 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 AL163051.1-201ENST00000569214 1512 ntBASIC14.9□□□□□ -0.02
LRTM2Q8N967 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
LRTM2Q8N967 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
LRTM2Q8N967 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM2Q8N967 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LRTM2Q8N967 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
LRTM2Q8N967 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM2Q8N967 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LRTM2Q8N967 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms