Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
EFCAB3Q8N7B9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 PSAT1P2-201ENST00000426107 972 ntBASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 Z85996.1-201ENST00000494644 937 ntBASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 FITM1-202ENST00000559294 800 ntBASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 METTL23-207ENST00000588783 1184 ntTSL 5 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 AL031985.4-201ENST00000642138 673 ntBASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
EFCAB3Q8N7B9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.14■□□□□ 0.5
EFCAB3Q8N7B9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
EFCAB3Q8N7B9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.14■□□□□ 0.5
EFCAB3Q8N7B9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
EFCAB3Q8N7B9 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AL390955.1-201ENST00000428694 934 ntBASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AC121493.1-201ENST00000602316 450 ntBASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
EFCAB3Q8N7B9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 KRT8P41-201ENST00000533985 1514 ntBASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 PCDHA12-202ENST00000613593 2588 ntBASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 LINC00896-202ENST00000609602 2128 ntBASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 AC134043.2-201ENST00000624206 2238 ntBASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
EFCAB3Q8N7B9 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms