Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 AC113347.1-201ENST00000413321 391 ntBASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 REXO1L9P-201ENST00000604264 2108 ntBASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 AC092865.7-201ENST00000641832 219 ntBASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 PHGDH-209ENST00000641074 1780 ntBASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.22■□□□□ 0.35
CCDC116Q8IYX3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 GCSHP2-201ENST00000560971 527 ntBASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 MIR3917-201ENST00000580971 93 ntBASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 LINC01023-201ENST00000606054 436 ntBASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 AL023973.1-201ENST00000624619 620 ntBASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 LINC01126-201ENST00000623515 1646 ntBASIC17.21■□□□□ 0.35
CCDC116Q8IYX3 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 NOC2LP1-202ENST00000452600 2235 ntBASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TERF1P1-201ENST00000311003 1181 ntBASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC005521.1-201ENST00000393351 872 ntBASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CCDC116Q8IYX3 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms