Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SCN4BQ8IWT1 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 AC087289.5-201ENST00000586076 3175 ntBASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 AC098818.2-201ENST00000564925 2320 ntBASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 LINC01126-201ENST00000623515 1646 ntBASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.22■□□□□ 0.67
SCN4BQ8IWT1 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 AC018445.3-201ENST00000624177 1945 ntBASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 AL450487.1-201ENST00000426799 995 ntBASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.21■□□□□ 0.67
SCN4BQ8IWT1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SCN4BQ8IWT1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 AL121894.2-201ENST00000602977 491 ntBASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SCN4BQ8IWT1 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms